Transcript: ENSRNOT00000008637.10 Pclo-202

Description

piccolo (presynaptic cytomatrix protein) [Source:RGD Symbol;Acc:69406]

Gene Synonyms

LOC108350654

Location

About this transcript

This transcript has 25 exons, is annotated with 167 domains and features, is associated with 2089 variant alleles and maps to 392 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000007608.9	Pclo-201	19978	5110aa	ENSRNOP00000007608.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M7V4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000008637.10	Pclo-202	19903	5085aa	ENSRNOP00000008637.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z9C7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 19,903 bps, Translation length: 5,085 residues

Version

ENSRNOT00000008637.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.