Transcript: ENSRNOT00000007427.10 Ybx3-201

Description

Y box binding protein 3 [Source:RGD Symbol;Acc:621056]

Gene Synonyms

Csda, Dbpa, MGC124554, RYB-A, Yb2

Location

About this transcript

This transcript has 10 exons, is annotated with 32 domains and features, is associated with 50 variant alleles and maps to 164 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000007427.10	Ybx3-201	2045	454aa	ENSRNOP00000007427.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MA18	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000068185.5	Ybx3-202	1836	383aa	ENSRNOP00000059241.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A0L4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,045 bps, Translation length: 454 residues

Version

ENSRNOT00000007427.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.