Transcript: ENSRNOT00000007144.8 Slc12a6-201

Description

solute carrier family 12, member 6 [Source:RGD Symbol;Acc:1311335]

Gene Synonyms

Kcc3, LOC362189, LOC691209

Location

Primary_assembly 3: 119,526,315-119,624,653 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 60 domains and features, is associated with 187 variant alleles and maps to 237 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000005196.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000007144.8	Slc12a6-201	6264	1135aa	ENSRNOP00000007144.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V6N7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000079727.3	Slc12a6-202	6081	1099aa	ENSRNOP00000073931.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6T0 A6HP47	-
ENSRNOT00000099025.2	Slc12a6-203	5912	1084aa	ENSRNOP00000084986.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZ36	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000104424.2	Slc12a6-204	3710	1129aa	ENSRNOP00000077276.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y638	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 25, Coding exons: 24, Transcript length: 6,264 bps, Translation length: 1,135 residues

Version

ENSRNOT00000007144.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000007144.8 Slc12a6-201

Summary

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Transcript: ENSRNOT00000007144.8 Slc12a6-201

Summary

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