Transcript: ENSRNOT00000006942.5 Ptprn2-201

Description

protein tyrosine phosphatase, receptor type N2 [Source:RGD Symbol;Acc:61904]

Gene Synonyms

PTP NE-6, PTPNE6, R-PTP-N2

Location

About this transcript

This transcript has 23 exons, is annotated with 30 domains and features, is associated with 3489 variant alleles and maps to 268 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000116222.1	Ptprn2-202	5229	1026aa	ENSRNOP00000093030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHT8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000006942.5	Ptprn2-201	5131	1004aa	ENSRNOP00000006942.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q63475	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 5,131 bps, Translation length: 1,004 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q63475

Version

ENSRNOT00000006942.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.