Transcript: ENSRNOT00000006549.7 Prpf40a-201

Description

pre-mRNA processing factor 40 homolog A [Source:RGD Symbol;Acc:1311401]

Gene Synonyms

Fnbp3, LOC295607

Location

About this transcript

This transcript has 23 exons, is annotated with 68 domains and features, is associated with 109 variant alleles and maps to 237 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000095713.2	Prpf40a-202	4251	1016aa	ENSRNOP00000083490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000128758.1	Prpf40a-204	4334	968aa	ENSRNOP00000107993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000104801.2	Prpf40a-203	3921	870aa	ENSRNOP00000083163.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVI3	-
ENSRNOT00000006549.7	Prpf40a-201	3806	929aa	ENSRNOP00000006549.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZJ92	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,806 bps, Translation length: 929 residues

Version

ENSRNOT00000006549.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.