Transcript: ENSRNOT00000006196.6 Itln1-201

Description

intelectin 1 [Source:RGD Symbol;Acc:1561048]

Gene Synonyms

LOC498284, MGC124684

Location

About this transcript

This transcript has 9 exons, is annotated with 6 domains and features, is associated with 499 variant alleles and maps to 106 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000006196.6	Itln1-201	1374	338aa	ENSRNOP00000006196.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PT30	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000154691.1	Itln1-202	1395	337aa	ENSRNOP00000099961.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,374 bps, Translation length: 338 residues

Version

ENSRNOT00000006196.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.