Transcript: ENSRNOT00000005399.9 Glipr1-201

Description

GLI pathogenesis-related 1 [Source:RGD Symbol;Acc:1305978]

Gene Synonyms

LOC299783, MGC108941

Location

About this transcript

This transcript has 6 exons, is annotated with 25 domains and features, is associated with 17 variant alleles and maps to 156 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005399.9	Glipr1-201	1005	251aa	ENSRNOP00000005399.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IGI2 F7EQZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000094244.2	Glipr1-202	977	250aa	ENSRNOP00000079444.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNI3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,005 bps, Translation length: 251 residues

Version

ENSRNOT00000005399.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.