Transcript: ENSRNOT00000005100.5 Slc43a2-201

Description

solute carrier family 43 member 2 [Source:RGD Symbol;Acc:1305819]

Gene Synonyms

LOC287532, RGD1305819

Location

About this transcript

This transcript has 14 exons, is annotated with 20 domains and features, is associated with 153 variant alleles and maps to 235 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099534.1	Slc43a2-202	4504	572aa	ENSRNOP00000097283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AUR9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000005100.5	Slc43a2-201	4492	568aa	ENSRNOP00000005100.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZDC2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 4,492 bps, Translation length: 568 residues

Version

ENSRNOT00000005100.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.