Transcript: ENSRNOT00000005035.9 Nup85-201

Description

nucleoporin 85 [Source:RGD Symbol;Acc:1311942]

Gene Synonyms

LOC287830, Pcnt1

Location

About this transcript

This transcript has 20 exons, is annotated with 4 domains and features, is associated with 31 variant alleles and maps to 206 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000142660.1	Nup85-204	3061	663aa	ENSRNOP00000111854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000005035.9	Nup85-201	2200	634aa	ENSRNOP00000005035.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4QQS8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000101986.2	Nup85-203	2107	634aa	ENSRNOP00000080318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPV6	-
ENSRNOT00000149257.1	Nup85-205	2089	628aa	ENSRNOP00000107531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000099013.2	Nup85-202	1981	592aa	ENSRNOP00000093249.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKK7	-

Summary

Statistics

Exons: 20, Coding exons: 18, Transcript length: 2,200 bps, Translation length: 634 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q4QQS8

Version

ENSRNOT00000005035.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.