Transcript: ENSRNOT00000004982.8 Mgat4d-201

Description

MGAT4 family, member D [Source:RGD Symbol;Acc:1310572]

Gene Synonyms

GL54D, LOC304646, MGC114453, RGD1310572

Location

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 615 variant alleles and maps to 122 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000004982.8	Mgat4d-201	1340	372aa	ENSRNOP00000106332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V8F8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000129520.1	Mgat4d-202	1527	371aa	ENSRNOP00000112744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,340 bps, Translation length: 372 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q4V8F8

Version

ENSRNOT00000004982.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.