Transcript: ENSRNOT00000004956.6 Col3a1-201

Description

collagen type III alpha 1 chain [Source:RGD Symbol;Acc:71029]

Gene Synonyms

MGC93704

Location

About this transcript

This transcript has 51 exons, is annotated with 75 domains and features, is associated with 128 variant alleles and maps to 385 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000127195.1	Col3a1-202	5437	1463aa	ENSRNOP00000109888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6INT2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000134009.1	Col3a1-203	5383	1445aa	ENSRNOP00000103041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000135866.1	Col3a1-204	5167	1373aa	ENSRNOP00000103575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000004956.6	Col3a1-201	4332	1399aa	ENSRNOP00000004956.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P13941	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 51, Coding exons: 51, Transcript length: 4,332 bps, Translation length: 1,399 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P13941

Version

ENSRNOT00000004956.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.