Transcript: ENSRNOT00000004694.7 Mr1-201

Description

major histocompatibility complex, class I-related [Source:RGD Symbol;Acc:1593291]

Gene Synonyms

Hlals, Hlals_mapped

Location

Primary_assembly 13: 69,850,420-69,868,305 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 27 domains and features, is associated with 120 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000003522.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000004694.7	Mr1-201	1594	353aa	ENSRNOP00000004694.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHB9 A6ICY4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000139053.1	Mr1-203	1321	327aa	ENSRNOP00000110330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000103270.2	Mr1-202	1212	346aa	ENSRNOP00000097744.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ATJ3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,594 bps, Translation length: 353 residues

Version

ENSRNOT00000004694.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSRNOT00000004694.7 Mr1-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSRNOT00000004694.7 Mr1-201

Summary

About Us

Get help

Our sister sites

Follow us