Transcript: ENSRNOT00000002240.9 Tbc1d23-201

Description

TBC1 domain family, member 23 [Source:RGD Symbol;Acc:1307925]

Gene Synonyms

LOC304019, RGD1307925

Location

About this transcript

This transcript has 19 exons, is annotated with 15 domains and features, is associated with 187 variant alleles and maps to 259 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000002240.9	Tbc1d23-201	3823	699aa	ENSRNOP00000002240.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4AAH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000102661.2	Tbc1d23-202	3745	684aa	ENSRNOP00000089797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAK0 A6IQM8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,823 bps, Translation length: 699 residues

Version

ENSRNOT00000002240.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.