Transcript: ENSRNOT00000001844.8 Rph3a-201

Description

rabphilin 3A [Source:RGD Symbol;Acc:620073]

Location

Primary_assembly 12: 41,203,485-41,279,531 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 38 domains and features, is associated with 237 variant alleles and maps to 269 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000001368.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000001844.8	Rph3a-201	4038	684aa	ENSRNOP00000001844.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LPB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000151514.1	Rph3a-205	3991	680aa	ENSRNOP00000103857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000119612.2	Rph3a-203	3955	668aa	ENSRNOP00000092026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AER8	-
ENSRNOT00000106706.2	Rph3a-202	3931	660aa	ENSRNOP00000086545.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3Z9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000143871.1	Rph3a-204	3830	657aa	ENSRNOP00000107113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 22, Coding exons: 20, Transcript length: 4,038 bps, Translation length: 684 residues

Version

ENSRNOT00000001844.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000001844.8 Rph3a-201

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Transcript: ENSRNOT00000001844.8 Rph3a-201

Summary

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