Transcript: ENSRNOT00000001685.9 Clip1-201

Description

CAP-GLY domain containing linker protein 1 [Source:RGD Symbol;Acc:67404]

Gene Synonyms

CLIP-170, MGC114234, Rsn

Location

Primary_assembly 12: 38,594,798-38,677,559 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 68 domains and features, is associated with 364 variant alleles and maps to 274 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000001247.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000102474.2	Clip1-207	8197	2182aa	ENSRNOP00000079550.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNR1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000096011.2	Clip1-205	8098	2149aa	ENSRNOP00000090148.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GIN2	-
ENSRNOT00000001685.9	Clip1-201	6610	2083aa	ENSRNOP00000001685.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MAH8 Q9JK25	-
ENSRNOT00000110644.2	Clip1-210	6007	1437aa	ENSRNOP00000087368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7M2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000105301.2	Clip1-208	5915	1402aa	ENSRNOP00000092485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AFK9	-
ENSRNOT00000098458.2	Clip1-206	5807	1389aa	ENSRNOP00000093783.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJJ0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000088002.3	Clip1-204	5664	1414aa	ENSRNOP00000073711.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K681	-
ENSRNOT00000105680.2	Clip1-209	5611	1320aa	ENSRNOP00000093663.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKB1	-
ENSRNOT00000078530.3	Clip1-202	5549	1303aa	ENSRNOP00000072766.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R7P7	-
ENSRNOT00000083261.3	Clip1-203	1567	340aa	ENSRNOP00000068884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTX8	-

Summary

Statistics

Exons: 25, Coding exons: 24, Transcript length: 6,610 bps, Translation length: 2,083 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JK25

Version

ENSRNOT00000001685.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000001685.9 Clip1-201

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Transcript: ENSRNOT00000001685.9 Clip1-201

Summary

About Us

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