Transcript: ENSRNOT00000001475.9 Brca2-201

Description

BRCA2, DNA repair associated [Source:RGD Symbol;Acc:2219]

Location

Primary_assembly 12: 4,895,447-4,936,194 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 59 domains and features, is associated with 81 variant alleles and maps to 315 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000001111.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000001475.9	Brca2-201	10350	3343aa	ENSRNOP00000001475.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66MH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000127843.1	Brca2-203	10629	3149aa	ENSRNOP00000101876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000103794.2	Brca2-202	10326	3335aa	ENSRNOP00000096899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B500	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000146025.1	Brca2-204	10108	3071aa	ENSRNOP00000107212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 27, Coding exons: 26, Transcript length: 10,350 bps, Translation length: 3,343 residues

Version

ENSRNOT00000001475.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSRNOT00000001475.9 Brca2-201

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Transcript: ENSRNOT00000001475.9 Brca2-201

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