Transcript: ENSRNOT00000001049.10 Abcf1-201

Description

ATP binding cassette subfamily F member 1 [Source:RGD Symbol;Acc:620286]

Gene Synonyms

Abc50

Location

Primary_assembly 20: 2,807,106-2,820,233 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 42 domains and features, is associated with 138 variant alleles and maps to 249 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000000799.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000001049.10	Abcf1-201	3338	868aa	ENSRNOP00000001049.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2PZQ3 A6KT63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000120548.2	Abcf1-203	3022	814aa	ENSRNOP00000098190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3L7	-
ENSRNOT00000113889.2	Abcf1-202	2972	810aa	ENSRNOP00000087295.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7P9 A0A8I6AAT6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,338 bps, Translation length: 868 residues

Version

ENSRNOT00000001049.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000001049.10 Abcf1-201

Summary

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Transcript: ENSRNOT00000001049.10 Abcf1-201

Summary

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