Transcript: ENSRNOT00000000787.10 Arid5b-201

Description

AT-rich interaction domain 5B [Source:RGD Symbol;Acc:1311735]

Gene Synonyms

LOC309728

Location

Primary_assembly 20: 20,306,712-20,489,686 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 25 domains and features, is associated with 461 variant alleles and maps to 208 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000000635.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000164224.1	Arid5b-203	7935	1242aa	ENSRNOP00000103812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000000787.10	Arid5b-201	7581	1184aa	ENSRNOP00000090849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEL5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105517.2	Arid5b-202	7006	941aa	ENSRNOP00000088828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGM4 A6JKU8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 7,581 bps, Translation length: 1,184 residues

Version

ENSRNOT00000000787.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000000787.10 Arid5b-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSRNOT00000000787.10 Arid5b-201

Summary

About Us

Get help

Our sister sites

Follow us