Transcript: ENSRNOT00000000787.9 Arid5b-201

Description

AT-rich interaction domain 5B [Source:RGD Symbol;Acc:1311735]

Gene Synonyms

LOC309728

Location

About this transcript

This transcript has 10 exons, is annotated with 20 domains and features, is associated with 448 variant alleles and maps to 153 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000000787.9	Arid5b-201	4037	1184aa	ENSRNOP00000090849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105517.1	Arid5b-202	3630	941aa	ENSRNOP00000088828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGM4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,037 bps, Translation length: 1,184 residues

Version

ENSRNOT00000000787.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.