Transcript: ENSRNOT00000000107.7 Pdzk1-201

Description

PDZ domain containing 1 [Source:RGD Symbol;Acc:70924]

Gene Synonyms

Clamp

Location

About this transcript

This transcript has 9 exons, is annotated with 30 domains and features, is associated with 212 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000000107.7	Pdzk1-201	1980	523aa	ENSRNOP00000000107.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JJ40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,980 bps, Translation length: 523 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JJ40

Version

ENSRNOT00000000107.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.