Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSRNOT00000120847.2 Opn4-203

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Description

opsin 4 [Source:RGD Symbol;Acc:621701]

Location

Primary_assembly 16: 9,926,902-9,935,810 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 44 domains and features, is associated with 105 variant alleles and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000053893.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000120847.2	Opn4-203	1994	474aa	ENSRNOP00000098459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KFQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000108205.3	Opn4-202	1804	446aa	ENSRNOP00000079898.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNW1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000091315.3	Opn4-201	1611	470aa	ENSRNOP00000069548.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8R456	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Protein summary

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Protein domains for ENSRNOP00000098459.1

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