Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSRNOT00000065754.6 Capn11-201

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Description

calpain 11 [Source:RGD Symbol;Acc:1302946]

Location

Primary_assembly 9: 22,841,522-22,863,032 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 31 domains and features, is associated with 109 variant alleles and maps to 201 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000026025.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000065754.6	Capn11-201	2619	715aa	ENSRNOP00000059934.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZXF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000114818.2	Capn11-203	2622	703aa	ENSRNOP00000083385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZX40	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000067104.5	Capn11-202	2330	708aa	ENSRNOP00000061253.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M7U2	-

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Protein summary

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Protein domains for ENSRNOP00000059934.3

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