Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSRNOT00000035906.5 Sspo-201

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Description

SCO-spondin [Source:RGD Symbol;Acc:1549716]

Location

Primary_assembly 4: 78,727,275-78,781,315 forward strand.

About this transcript

This transcript has 104 exons, is annotated with 322 domains and features, is associated with 273 variant alleles and maps to 867 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000025848.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000152821.1	Sspo-202	15889	5144aa	ENSRNOP00000108533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000035906.5	Sspo-201	15880	5141aa	ENSRNOP00000037189.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q700K0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Protein summary

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Protein domains for ENSRNOP00000037189.2

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