Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSRNOT00000016843.7 Shox2-201

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Description

SHOX homeobox 2 [Source:RGD Symbol;Acc:3674]

Location

Primary_assembly 2: 153,527,571-153,537,161 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 21 domains and features, is associated with 47 variant alleles and maps to 211 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000012478.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000016843.7	Shox2-201	2549	331aa	ENSRNOP00000016843.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J5K8 G3V7M9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Protein summary

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Protein domains for ENSRNOP00000016843.5

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