Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Atp13a3 ENSRNOG00000066681

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Description

ATPase 13A3 [Source:RGD Symbol;Acc:1590881]

Gene Synonyms

LOC360728

Location

Primary_assembly 11: 83,870,218-83,944,662 forward strand.

GRCr8:CM070401.1

About this gene

This gene has 3 transcripts (splice variants), 230 orthologues, 21 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000108436.2	Atp13a3-202	5028	1249aa	ENSRNOP00000090335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADK9 A6JRU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000164180.1	Atp13a3-203	4947	1222aa	ENSRNOP00000111054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000098527.2	Atp13a3-201	4793	1219aa	ENSRNOP00000089051.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAY5 A6JRU7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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