Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: Oas1k ENSRNOG00000062846

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Description

2 ' -5 ' oligoadenylate synthetase 1K [Source:RGD Symbol;Acc:1359279]

Location

Primary_assembly 12: 41,422,937-41,432,330 reverse strand.

GRCr8:CM070402.1

About this gene

This gene has 2 transcripts (splice variants), 127 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000075234.4	Oas1k-201	1581	356aa	ENSRNOP00000066212.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R9N6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000075317.5	Oas1k-202	1132	353aa	ENSRNOP00000066431.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5MYX2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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