Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Psme1-ps1 ENSRNOG00000061359

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Description

proteasome activator subunit 1, pseudogene 1 [Source:RGD Symbol;Acc:1597686]

Gene Synonyms

LOC685197

Location

Primary_assembly 17: 54,764,056-54,870,626 forward strand.

GRCr8:CM070407.1

About this gene

This gene has 6 transcripts (splice variants), 208 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000142055.1	Psme1-ps1-205	1428	357aa	ENSRNOP00000112511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000126179.1	Psme1-ps1-203	1707	249aa	ENSRNOP00000112388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K9B8	-
ENSRNOT00000123346.1	Psme1-ps1-202	1251	298aa	ENSRNOP00000103506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000143351.1	Psme1-ps1-206	1188	277aa	ENSRNOP00000103150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000140866.1	Psme1-ps1-204	1149	264aa	ENSRNOP00000105246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000089943.3	Psme1-ps1-201	1138	274aa	ENSRNOP00000069572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVP9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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