Gene: L1cam ENSRNOG00000061230

Description

L1 cell adhesion molecule [Source:RGD Symbol;Acc:619777]

Gene Synonyms

Hsas, Hyd, L1, L1cam_mapped, N-CAM L1, N-CAM-L1, NCAM-L1, NCAML1, NILE, NgCAM

Location

Primary_assembly X: 151,597,277-151,623,857 reverse strand.

mRatBN7.2:CM026994.1

About this gene

This gene has 4 transcripts (splice variants), 169 orthologues, 35 paralogues and is associated with 53 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000084390.2	L1cam-202	5092	1294aa	ENSRNOP00000075314.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KA95	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000118735.1	L1cam-204	5318	1250aa	ENSRNOP00000094708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMQ8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000114250.1	L1cam-203	5165	1254aa	ENSRNOP00000093196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJJ1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000080945.2	L1cam-201	5075	1255aa	ENSRNOP00000075170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZPC4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Gene: L1cam ENSRNOG00000061230

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Gene: L1cam ENSRNOG00000061230

Summary

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