Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
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ID History
- Gene history

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Gene: Arcn1 ENSRNOG00000061108

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Description

archain 1 [Source:RGD Symbol;Acc:1359110]

Gene Synonyms

MGC94158

Location

Primary_assembly 8: 53,954,404-53,979,005 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 2 transcripts (splice variants), 228 orthologues and is associated with 15 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000082687.3	Arcn1-201	3458	511aa	ENSRNOP00000072654.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R622 A6J409 Q66H80	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000110390.2	Arcn1-202	3309	502aa	ENSRNOP00000081381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZSE6	-

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Summary

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