Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Gene tree
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Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Gene: Shoc1 ENSRNOG00000060520

Description

shortage in chiasmata 1 [Source:RGD Symbol;Acc:1586646]

Gene Synonyms

AABR07048387.1, LOC686050

Location

GRCr8:CM070395.1

About this gene

This gene has 1 transcript (splice variant), 136 orthologues and is associated with 3 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000087380.3	Shoc1-201	5768	1478aa	ENSRNOP00000071212.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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