Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Strn3 ENSRNOG00000060335

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Description

striatin 3 [Source:RGD Symbol;Acc:621827]

Gene Synonyms

Gs2na, Sg2na

Location

Primary_assembly 6: 69,047,776-69,134,102 reverse strand.

mRatBN7.2:CM026979.1

About this gene

This gene has 4 transcripts (splice variants), 214 orthologues, 2 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000077578.2	Strn3-201	4139	794aa	ENSRNOP00000074395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P58405-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000106600.1	Strn3-203	4028	757aa	ENSRNOP00000087402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGH7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000111997.1	Strn3-204	3998	747aa	ENSRNOP00000081686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUH2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000088720.2	Strn3-202	3887	710aa	ENSRNOP00000071600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PT82	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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