Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Gene: Ldb3 ENSRNOG00000059166

Description

LIM domain binding 3 [Source:RGD Symbol;Acc:1564875]

Gene Synonyms

LOC498587, RGD1564875, ZASP

Location

Primary_assembly 16: 9,862,161-9,926,985 reverse strand.

GRCr8:CM070406.1

About this gene

This gene has 6 transcripts (splice variants), 220 orthologues, 7 paralogues and is associated with 29 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000087521.3	Ldb3-205	5102	771aa	ENSRNOP00000070984.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MJ01	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000086627.3	Ldb3-204	5021	744aa	ENSRNOP00000075243.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKD4	-
ENSRNOT00000083623.3	Ldb3-202	4976	729aa	ENSRNOP00000070707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JYM0	-
ENSRNOT00000104381.2	Ldb3-206	4916	709aa	ENSRNOP00000076700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y5H4	-
ENSRNOT00000085414.3	Ldb3-203	4706	679aa	ENSRNOP00000072185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2C4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000081631.3	Ldb3-201	1587	330aa	ENSRNOP00000070370.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXR0	-

Gene: Ldb3 ENSRNOG00000059166

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Gene: Ldb3 ENSRNOG00000059166

Summary

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