Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Rab11fip1 ENSRNOG00000058940

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Description

RAB11 family interacting protein 1 [Source:RGD Symbol;Acc:1562965]

Gene Synonyms

LOC498650, RGD1562965, Rab11-FIP1

Location

Primary_assembly 16: 71,589,753-71,620,341 forward strand.

GRCr8:CM070406.1

About this gene

This gene has 2 transcripts (splice variants), 165 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000078128.3	Rab11fip1-201	7848	1189aa	ENSRNOP00000070687.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JYK2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000086082.4	Rab11fip1-202	6225	648aa	ENSRNOP00000073557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3B7T9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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