Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Arhgap4 ENSRNOG00000058545

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Description

Rho GTPase activating protein 4 [Source:RGD Symbol;Acc:628901]

Location

Primary_assembly X: 156,783,776-156,802,450 reverse strand.

GRCr8:CM070411.1

About this gene

This gene has 5 transcripts (splice variants), 242 orthologues, 3 paralogues and is associated with 17 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000085410.3	Arhgap4-201	6997	965aa	ENSRNOP00000069460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVF0 A6KRT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000109725.2	Arhgap4-203	6904	934aa	ENSRNOP00000094863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AIK5 A6KRU1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000109822.2	Arhgap4-204	6865	921aa	ENSRNOP00000083983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZY52	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000117215.2	Arhgap4-205	6733	877aa	ENSRNOP00000095360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AN89	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000104884.2	Arhgap4-202	6412	770aa	ENSRNOP00000091062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GIQ7	-

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Summary

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