Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Rfx8 ENSRNOG00000058243

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Description

regulatory factor X8 [Source:RGD Symbol;Acc:1560724]

Gene Synonyms

LOC501127, LOC501128, RGD1560724, RGD1565676

Location

Primary_assembly 9: 49,453,289-49,515,134 reverse strand.

GRCr8:CM070399.1

About this gene

This gene has 3 transcripts (splice variants), 101 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000108584.2	Rfx8-202	2143	597aa	ENSRNOP00000085957.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GDI7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000161743.1	Rfx8-203	2056	568aa	ENSRNOP00000110617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000078196.3	Rfx8-201	2026	558aa	ENSRNOP00000072601.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K3E1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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