Gene: Itga5 ENSRNOG00000057451

Description

integrin subunit alpha 5 [Source:RGD Symbol;Acc:2925]

Gene Synonyms

Itga5_mapped, Itga5_retired

Location

GRCr8:CM070397.1

About this gene

This gene has 2 transcripts (splice variants), 268 orthologues, 17 paralogues and is associated with 7 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000109863.2	Itga5-202	4586	1153aa	ENSRNOP00000088245.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7G7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000087748.3	Itga5-201	4395	1099aa	ENSRNOP00000071805.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1E2 A6KD08	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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