Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Cd300a ENSRNOG00000057058

.

Description

Cd300a molecule [Source:RGD Symbol;Acc:1583719]

Gene Synonyms

CLM-8, LOC501736

Location

Primary_assembly 10: 100,428,826-100,442,958 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 3 transcripts (splice variants), 153 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000085262.3	Cd300a-202	2268	313aa	ENSRNOP00000072406.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2W8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000103989.2	Cd300a-203	2338	310aa	ENSRNOP00000093444.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJM7 A6HKJ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000079545.3	Cd300a-201	2074	298aa	ENSRNOP00000073730.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K697	-

.

Summary

.

.