Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Actn1 ENSRNOG00000056756

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Description

actinin, alpha 1 [Source:RGD Symbol;Acc:70907]

Location

Primary_assembly 6: 98,998,556-99,093,251 reverse strand.

mRatBN7.2:CM026979.1

About this gene

This gene has 6 transcripts (splice variants), 221 orthologues, 37 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000088795.2	Actn1-202	3562	914aa	ENSRNOP00000069598.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6T487	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000079824.2	Actn1-201	3667	887aa	ENSRNOP00000074946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6GMN8	-
ENSRNOT00000091560.2	Actn1-203	3471	892aa	ENSRNOP00000068851.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6T487 Q9Z1P2	-
ENSRNOT00000110416.1	Actn1-204	3426	890aa	ENSRNOP00000097894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AV34	-
ENSRNOT00000112260.1	Actn1-206	3333	859aa	ENSRNOP00000085943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GDI3	-
ENSRNOT00000111498.1	Actn1-205	2724	907aa	ENSRNOP00000087449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A472	-

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Summary

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