Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
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Gene: Trnp1 ENSRNOG00000055936

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Description

TMF1-regulated nuclear protein 1 [Source:RGD Symbol;Acc:1582917]

Gene Synonyms

LOC100910632, LOC688990

Location

Primary_assembly 5: 150,989,973-150,997,277 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 3 transcripts (splice variants) and 134 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000097339.2	Trnp1-202	2212	225aa	ENSRNOP00000089751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0Y1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000080602.3	Trnp1-201	2175	225aa	ENSRNOP00000071624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0Y1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000135803.1	Trnp1-203	1066	225aa	ENSRNOP00000100968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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