Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Ctnnb1 ENSRNOG00000054172

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Description

catenin beta 1 [Source:RGD Symbol;Acc:70487]

Gene Synonyms

Catnb

Location

Primary_assembly 8: 129,517,545-129,544,662 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 2 transcripts (splice variants), 197 orthologues, 4 paralogues and is associated with 122 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000101345.2	Ctnnb1-202	3789	781aa	ENSRNOP00000094665.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKV3 A6I428	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000079085.3	Ctnnb1-201	2951	781aa	ENSRNOP00000068620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JT93	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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