Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Phf11 ENSRNOG00000053891

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Description

PHD finger protein 11 [Source:RGD Symbol;Acc:1310853]

Gene Synonyms

LOC100362408, LOC361051, Phf11a

Location

Primary_assembly 15: 37,568,090-37,591,016 reverse strand.

GRCr8:CM070405.1

About this gene

This gene has 2 transcripts (splice variants), 171 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114019.2	Phf11-202	1662	336aa	ENSRNOP00000086591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5I0E2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000074738.5	Phf11-201	1441	334aa	ENSRNOP00000066769.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RB46	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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