Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
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ID History
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Gene: Fmr1nb ENSRNOG00000053397

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Description

FMR1 neighbor [Source:RGD Symbol;Acc:1564059]

Gene Synonyms

LOC293918, RGD1564059

Location

Primary_assembly X: 152,354,238-152,377,051 forward strand.

GRCr8:CM070411.1

About this gene

This gene has 2 transcripts (splice variants), 60 orthologues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000090728.3	Fmr1nb-201	934	242aa	ENSRNOP00000072440.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2Z5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000116951.2	Fmr1nb-202	587	158aa	ENSRNOP00000086485.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5X6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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