Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Prph ENSRNOG00000052880

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Description

peripherin [Source:RGD Symbol;Acc:3414]

Gene Synonyms

Perf, Prph1

Location

Primary_assembly 7: 132,097,285-132,101,068 forward strand.

GRCr8:CM070397.1

About this gene

This gene has 3 transcripts (splice variants), 190 orthologues, 72 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000094354.2	Prph-202	1856	506aa	ENSRNOP00000097710.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AT59 A6KCD4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000089211.3	Prph-201	1760	474aa	ENSRNOP00000072008.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KCD5 F1M7P4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000123666.1	Prph-203	1368	435aa	ENSRNOP00000104861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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