Gene: Cacna1a ENSRNOG00000052707

Description

calcium voltage-gated channel subunit alpha1 A [Source:RGD Symbol;Acc:2244]

Gene Synonyms

BI, BccA1, Cav2.1, LOC688360, RBA-I, rbA-1

Location

Primary_assembly 19: 40,425,560-40,724,599 reverse strand.

GRCr8:CM070409.1

About this gene

This gene has 5 transcripts (splice variants), 278 orthologues, 26 paralogues and is associated with 63 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000083448.3	Cacna1a-201	9384	2458aa	ENSRNOP00000070304.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXK1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000102295.2	Cacna1a-202	9342	2444aa	ENSRNOP00000080121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPG4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000106526.2	Cacna1a-203	9027	2339aa	ENSRNOP00000096924.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B516	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000155077.1	Cacna1a-205	6612	2203aa	ENSRNOP00000101173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000114797.2	Cacna1a-204	4338	776aa	ENSRNOP00000078109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y6Y2	-

Gene: Cacna1a ENSRNOG00000052707

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Gene: Cacna1a ENSRNOG00000052707

Summary

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