Gene: Pkd1l3 ENSRNOG00000052310

Description

polycystin 1 like 3, transient receptor potential channel interacting [Source:RGD Symbol;Acc:2324490]

Gene Synonyms

LOC100362565

Location

GRCr8:CM070409.1

About this gene

This gene has 2 transcripts (splice variants), 328 orthologues, 9 paralogues and is associated with 1 phenotype.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000082380.3	Pkd1l3-201	6531	2176aa	ENSRNOP00000073135.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K4Q7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000089134.3	Pkd1l3-202	7382	2126aa	ENSRNOP00000069332.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JV34	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Upcoming Ensembl Platform Transition