Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LOC500827 ENSRNOG00000051928

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Description

RIKEN cDNA 1700017N19 gene [Source:MGI Symbol;Acc:MGI:1913855]

Location

Primary_assembly 7: 35,411,555-35,443,320 forward strand.

mRatBN7.2:CM026980.1

About this gene

This gene has 3 transcripts (splice variants), 116 orthologues, 1 paralogue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000081374.2	LOC500827-202	1946	469aa	ENSRNOP00000069887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R9PXT2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000080150.2	LOC500827-201	1826	375aa	ENSRNOP00000075587.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2RBF5	-
ENSRNOT00000104994.1	LOC500827-203	1661	419aa	ENSRNOP00000090339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9W0	-

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Summary

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