Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Kpna1 ENSRNOG00000051711

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Description

karyopherin subunit alpha 1 [Source:RGD Symbol;Acc:735064]

Location

Primary_assembly 11: 64,717,563-64,774,623 reverse strand.

mRatBN7.2:CM026984.1

About this gene

This gene has 4 transcripts (splice variants), 200 orthologues, 8 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117532.1	Kpna1-204	4903	547aa	ENSRNOP00000094957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AKK8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000097087.1	Kpna1-203	5190	145aa	ENSRNOP00000089735.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8S8	-
ENSRNOT00000084540.2	Kpna1-202	4966	538aa	ENSRNOP00000070449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q56R20	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000078285.2	Kpna1-201	4894	544aa	ENSRNOP00000071569.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0T0	-

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Summary

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