Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Cttn ENSRNOG00000050994

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Description

cortactin [Source:RGD Symbol;Acc:619839]

Gene Synonyms

Cttnb, MGC93456

Location

Primary_assembly 1: 209,029,048-209,058,211 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 5 transcripts (splice variants), 206 orthologues, 4 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000047669.7	Cttn-202	2774	509aa	ENSRNOP00000050255.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZGE6 Q66HL2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000054859.7	Cttn-203	2774	509aa	ENSRNOP00000051742.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TAH0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000028283.7	Cttn-201	2735	496aa	ENSRNOP00000028283.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QFA3	-
ENSRNOT00000079805.3	Cttn-204	2690	481aa	ENSRNOP00000072540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R7C5	-
ENSRNOT00000092916.3	Cttn-205	2663	472aa	ENSRNOP00000075952.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2URS9	-

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Summary

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