Gene: Col25a1 ENSRNOG00000050706

Description

collagen type XXV alpha 1 chain [Source:RGD Symbol;Acc:1590105]

Gene Synonyms

LOC102553088, LOC687064

Location

GRCr8:CM070392.1

About this gene

This gene has 6 transcripts (splice variants), 138 orthologues, 36 paralogues and is associated with 3 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000075728.4	Col25a1-203	7478	698aa	ENSRNOP00000066571.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RAM0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000127813.1	Col25a1-206	7445	687aa	ENSRNOP00000103010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000071463.5	Col25a1-201	7382	666aa	ENSRNOP00000064468.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R513	-
ENSRNOT00000096153.2	Col25a1-204	7337	651aa	ENSRNOP00000083624.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GAZ6	-
ENSRNOT00000123001.1	Col25a1-205	7328	648aa	ENSRNOP00000103239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000074816.5	Col25a1-202	2538	640aa	ENSRNOP00000067665.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RDG5	-

Summary