Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Ccdc7b ENSRNOG00000050191

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Description

coiled-coil domain containing 7B [Source:RGD Symbol;Acc:1359250]

Gene Synonyms

Biot2, Ccdc7, LOC497041, LOC679727, MGC93946

Location

Primary_assembly 19: 74,079,566-74,152,821 forward strand.

GRCr8:CM070409.1

About this gene

This gene has 5 transcripts (splice variants), 73 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000075053.5	Ccdc7b-202	2062	512aa	ENSRNOP00000066191.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AYJ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000120098.2	Ccdc7b-205	1977	511aa	ENSRNOP00000081348.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZST0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000108090.2	Ccdc7b-203	1876	450aa	ENSRNOP00000087576.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4F1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000113844.2	Ccdc7b-204	1771	455aa	ENSRNOP00000097465.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AWE1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000073524.4	Ccdc7b-201	1270	382aa	ENSRNOP00000065676.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R884	-

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Summary

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