Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Xlr5c ENSRNOG00000050177

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Description

X-linked lymphocyte-regulated 5C [Source:RGD Symbol;Acc:6495748]

Gene Synonyms

LOC100366231, LOC100911002

Location

Primary_assembly X: 156,141,497-156,154,712 reverse strand.

GRCr8:CM070411.1

About this gene

This gene has 4 transcripts (splice variants), 187 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSRNOT00000148327.1	Xlr5c-202	1719	235aa	ENSRNOP00000106958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000157125.1	Xlr5c-203	1381	234aa	ENSRNOP00000108643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000122448.1	Xlr5c-201	1096	202aa	ENSRNOP00000110822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSRNOT00000172662.1	Xlr5c-204	827	178aa	ENSRNOP00000108526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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